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Adder Dispersal Distances |
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Vicar
Senior Member Joined: 02 Sep 2004 Location: United Kingdom Status: Offline Points: 1184 |
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Aye,
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calumma
Senior Member Joined: 27 Jun 2003 Location: United Kingdom Status: Offline Points: 375 |
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And here it is.
What this graphic shows is an estimate of what could be considered minimum (darker circles) to maximum (lighter circles) distribution. The minimum distribution is based on a value of 0.64 km, whilst the maximum distribution is based on a value of 3.32 km (the maximum confirmed, non-historical, nearest neighbour value). Of course, at the moment these figures and calculations are just for fun - and to see if in principle this type of analysis is worthwhile. I need to review some aspects of the calculations script. In particular I need to decide what records are included in the nearest neighbour calculation. |
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calumma
Senior Member Joined: 27 Jun 2003 Location: United Kingdom Status: Offline Points: 375 |
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Steve, eyeballing your graph, it looks like in Surrey a location that is situated
at a distance of just over 1 km will have a ~80% probability of being occupied by adder. The maximum distance appears to be just under 4 km. Strikingly similar to what I have estimated for Kent I wonder if this is a true comparison or an inevitable consequence of us both using nearest neighbour to analyse effort constrained survey data? Your graph appears to have a few bumps in it past 4 km. Are these just artifacts created by the plotting software? Edit: Need to better eyeball the graph! Edited by calumma |
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Vicar
Senior Member Joined: 02 Sep 2004 Location: United Kingdom Status: Offline Points: 1184 |
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P0 = percentage probability of a sighting being from 0 to 1 km to its nearest neighbour. P1 = 1 to 2 Km etc |
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calumma
Senior Member Joined: 27 Jun 2003 Location: United Kingdom Status: Offline Points: 375 |
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I see, the bumps are due to grouping data into 1 km intervals. Presumably
there are some intervals with no data and you therefore need to either truncate the tail or assume the same probability for intervals with missing data? It may also be interesting to look at this the other way and generate a table with data illustrating the distances at which there are 95%, 75%, 25% probabilities of detecting each species. |
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Vicar
Senior Member Joined: 02 Sep 2004 Location: United Kingdom Status: Offline Points: 1184 |
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heh,
What you see is the difference between real data and a mathematical function. I have tried curve-fitting, with some success. Yes, the right hand columns of that table (which was too wide to post) has percentile distances such as 95% etc. I can't see any way of building a distribution profile without using range bins...however; the range bins can be any size (just a number in the code). I think I derived the 95%iles etc using 100m bins. I'll dig out the numbers. |
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Vicar
Senior Member Joined: 02 Sep 2004 Location: United Kingdom Status: Offline Points: 1184 |
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Oopps, Just noticed that those figures I gave for Adder were a year out of date We've now increased the known occupancy (by hectare) by 50%.
New figures below. Note that the cumulative probability only adds up to 99.4%, so there must be outlier records beyond 10km nearest neighbour Also note a 6% swing in probability for the shortest range, which is due to targeted survey effort. How and where you survey affects these figures significantly. There needs to be a metric of county survey completeness, which will have to include negative records (where we looked but didn't find animals). Edited by Vicar |
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calumma
Senior Member Joined: 27 Jun 2003 Location: United Kingdom Status: Offline Points: 375 |
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Yes I quite agree. I have attempted to investigate this by looking at the number of occupied survey units and comparing this with the number of survey units for which data has been collected. There are still some issues that I need to overcome with this analysis but in Kent, adder has been recorded in 229 km squares. This represents an occupancy of just 5.2 %. However, when you control for survey effort the occupancy increases to 14.2%. Defining effort becomes problematic when targeted survey results are combined with anecdotal records. You probably have this information already Steve, but if anybody else would like to quickly work out how many 10 km or 1 km squares there are in a vice county this BRC website is a very useful resource. |
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Vicar
Senior Member Joined: 02 Sep 2004 Location: United Kingdom Status: Offline Points: 1184 |
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HI Lee,
I didn't know of that resource...very useful! Any ideas how I get the data to populate dominant habitat type by grid square?? |
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calumma
Senior Member Joined: 27 Jun 2003 Location: United Kingdom Status: Offline Points: 375 |
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What I think I am now settling on is using the upper quartile nearest
neighbour value to define where core range is likely to be. This represents 75% of recorded observations. To this I apply a 'buffer' that is defined by the 95 percentile. I have chosen 95% rather than 100% to eliminate outliers. The figures I currently have are 0.64 km for core range and 1.2 km for the buffer (measured from the edge of core range). Since what I aim to describe is the predicted distribution of each species: Predicted distribution = core range + buffer. For adder this is 1.84 km. Reading from your graph, this would represent a distance at which there is a ~25% chance of encountering adder in Surrey. It is also annoyingly close to the 2 km that I started this thread with Of course not all areas within the predicted distribution will be suitable and this is where the HSI assessment will come in. Now the big question Does anybody have similar data for areas outside of Kent and Surrey? Edit: note that I sometimes use the terms 'distribution' and 'range' to mean the same thing. I've cleaned up the text to make it a little more consistent. Edited by calumma |
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